miRBase entry: cfa-let-7g

Stem-loop cfa-let-7g


Accession
MI0008036
Description
Canis familiaris cfa-let-7g precursor miRNA
Gene family
MIPF0000002; let-7


Sequence

UGAGGUAGUAGUUUGUACAGUUugagggucuaugauaccacccgguacaggagauaacuguacaggccacugccuugcc
.((((((((.((((((((((((.....((((.((.((((....))))))..)))))))))))))))).))))))))...

Structure
--U        A            ugagg    -a  a    a 
   GAGGUAGU GUUUGUACAGUU     gucu  ug uacc c
   |||||||| ||||||||||||     ||||  || ||||  
   uuccguca cggacaugucaa     uaga  ac augg c
ccg        c            -----    gg  -    c 


Annotation confidence Not enough data
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Genome context
chr20: 37501074-37501152 [+]

Database links

Mature cfa-let-7g

Accession MIMAT0006637
Description Canis familiaris cfa-let-7g mature miRNA
Sequence 1 - UGAGGUAGUAGUUUGUACAGUU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415