miRBase entry: cfa-mir-191

Stem-loop cfa-mir-191


Accession
MI0008037
Description
Canis familiaris cfa-mir-191 precursor miRNA
Gene family
MIPF0000194; mir-191


Sequence

CAACGGAAUCCCAAAAGCAGCUguugucuccagagcauuccagcugcgcuuggauuucguuccc
.((((((((((.((..(((((((.(((.......)))...)))))))..))))))))))))...

Structure
--C          C  AA       --u   cu 
   AACGGAAUCC AA  GCAGCUg   ugu  c
   |||||||||| ||  |||||||   |||  c
   uugcuuuagg uu  cgucgac   acg  a
ccc          -  cg       cuu   ag 


Annotation confidence Not enough data
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Genome context
chr20: 40144135-40144198 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cfa-mir-191
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-191

Accession MIMAT0006638
Description Canis familiaris cfa-miR-191 mature miRNA
Sequence 1 - CAACGGAAUCCCAAAAGCAGCU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415