Stem-loop cfa-mir-23a

Accession

MI0008039

Description

Canis familiaris cfa-mir-23a precursor miRNA

Gene family

MIPF0000027; mir-23

Sequence

guuccuggggaugggauuugcugccugucacaaAUCACAUUGCCAGGGAUUU
((((((((.((((.((((((.((.....)))))))).)))).))))))))..

Structure

--        g    g      c  c 
  guuccugg gaug gauuug ug c
  |||||||| |||| |||||| || u
  UAGGGACC UUAC CUAaac ac g
UU        G    A      -  u 

Annotation confidence Not enough data

Genome context

chr20: 48620335-48620386 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from cfa-mir-23a

Mature cfa-miR-23a

• Accession: MIMAT0006640
• Description: Canis familiaris cfa-miR-23a mature miRNA
• Sequence: 34 - AUCACAUUGCCAGGGAUUU - 52
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415