miRBase entry: cfa-mir-708

Stem-loop cfa-mir-708


Accession
MI0008043
Description
Canis familiaris cfa-mir-708 precursor miRNA
Gene family
MIPF0000397; mir-708


Sequence

AAGGAGCUUACAAUCUAGCUGGGggugaacggcuugcacaugaacgcaacuagacugugagcuucuaga
.(((((((((((.((((((((........))))((((........)))).)))).)))))))))))...

Structure
--A           A    -----------------    GGg 
   AGGAGCUUACA UCUA                 GCUG   g
   ||||||||||| ||||                 ||||    
   ucuucgagugu agau                 cggc   u
aga           c    caacgcaaguacacguu    aag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr21: 19542577-19542645 [+]

Database links

Mature cfa-miR-708

Accession MIMAT0006643
Description Canis familiaris cfa-miR-708 mature miRNA
Sequence 1 - AAGGAGCUUACAAUCUAGCUGGG - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415