miRBase entry: cfa-mir-26a-1

Stem-loop cfa-mir-26a-1


Accession
MI0008058
Description
Canis familiaris cfa-mir-26a-1 precursor miRNA
Gene family
MIPF0000043; mir-26


Sequence

UUCAAGUAAUCCAGGAUAGGCUgugcaggucccaaugggccuauucuugguuacuugcacg
..(((((((((.((((((((((...............)))))))))).)))))))))....

Structure
--UU         C          gugcag 
    CAAGUAAUC AGGAUAGGCU      g
    ||||||||| ||||||||||      u
    guucauugg ucuuauccgg      c
gcac         u          guaacc 


Annotation confidence Not enough data
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Genome context
chr23: 7747073-7747133 [+]

Database links

Mature cfa-miR-26a

Accession MIMAT0006595
Description Canis familiaris cfa-miR-26a mature miRNA
Sequence 1 - UUCAAGUAAUCCAGGAUAGGCU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415