miRBase entry: cfa-mir-499

Stem-loop cfa-mir-499


Accession
MI0008059
Description
Canis familiaris cfa-mir-499 precursor miRNA
Gene family
MIPF0000173; mir-499


Sequence

UUAAGACUUGCAGUGAUGUUUaacuccucuccacgugaacaucacagcaagucugugcu
...((((((((.((((((((((.............)))))))))).)))))))).....

Structure
--UUA        A          acucc 
     AGACUUGC GUGAUGUUUa     u
     |||||||| ||||||||||     c
     ucugaacg cacuacaagu     u
ucgug        a          gcacc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr24: 24029549-24029607 [+]

Database links

Mature cfa-miR-499

Accession MIMAT0006655
Description Canis familiaris cfa-miR-499 mature miRNA
Sequence 1 - UUAAGACUUGCAGUGAUGUUU - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415