miRBase entry: cfa-mir-124-2

Stem-loop cfa-mir-124-2


Accession
MI0008074
Description
Canis familiaris cfa-mir-124-2 precursor miRNA
Gene family
MIPF0000021; mir-124


Sequence

guguucacagcggaccuugauuuaaugucauacaauUAAGGCACGCGGUGAAUGCCA
((((((((.(((..((((((((...........))))))))..))).))))))))..

Structure
--        a   ga        uaau 
  guguucac gcg  ccuugauu    g
  |||||||| |||  ||||||||    u
  CGUAAGUG CGC  GGAAUuaa    c
AC        G   AC        caua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr29: 14264389-14264445 [+]

Database links

Mature cfa-miR-124

Accession MIMAT0006657
Description Canis familiaris cfa-miR-124 mature miRNA
Sequence 37 - UAAGGCACGCGGUGAAUGCCA - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415