Stem-loop cfa-mir-218-1

Accession

MI0008079

Description

Canis familiaris cfa-mir-218-1 precursor miRNA

Gene family

MIPF0000026; mir-218

Sequence

UUGUGCUUGAUCUAACCAUGUgguugccagguaugaguaaaacaugguuccgucaagcaccaug
..(((((((((..((((((((..((((((....)).)))).))))))))..)))))))))....

Structure

--UU         CU        gg    -  g 
    GUGCUUGAU  AACCAUGU  uugc ca g
    |||||||||  ||||||||  |||| ||  
    cacgaacug  uugguaca  aaug gu u
guac         cc        -a    a  a 

Annotation confidence Not enough data

Genome context

chr3: 89044709-89044772 [-]

Mature cfa-miR-218

• Accession: MIMAT0006672
• Description: Canis familiaris cfa-miR-218 mature miRNA
• Sequence: 1 - UUGUGCUUGAUCUAACCAUGU - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415