miRBase entry: cfa-mir-7-2

Stem-loop cfa-mir-7-2


Accession
MI0008085
Description
Canis familiaris cfa-mir-7-2 precursor miRNA
Gene family
MIPF0000022; mir-7


Sequence

UGGAAGACUAGUGAUUUUGUUGUugucucacugcauccaacaacaagucccagucugccaca
(((.(((((.(.(((((.(((((((............))))))))))))).))))).)))..

Structure
--   A     A U     U       ucuca 
  UGG AGACU G GAUUU GUUGUug     c
  ||| ||||| | ||||| |||||||      
  acc ucuga c cugaa caacaac     u
ac   g     c -     -       cuacg 


Annotation confidence Not enough data
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Genome context
chr3: 51802454-51802515 [+]

Database links

Mature cfa-miR-7

Accession MIMAT0006634
Description Canis familiaris cfa-miR-7 mature miRNA
Sequence 1 - UGGAAGACUAGUGAUUUUGUUGU - 23
Evidence not_experimental

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415