miRBase entry: cfa-mir-1271

Stem-loop cfa-mir-1271


Accession
MI0008095
Description
Canis familiaris cfa-mir-1271 precursor miRNA
Gene family
MIPF0000483; mir-1271


Sequence

CUUGGCACCUAGUAAGCACUcaguaaauacuuguugagugccugcuaugugccaggca
((((((((.(((((.(((((((((((....))))))))))).))))).))))))))..

Structure
--        C     A           a 
  CUUGGCAC UAGUA GCACUcaguaa u
  |||||||| ||||| |||||||||||  
  ggaccgug aucgu cgugaguuguu a
ac        u     c           c 


Annotation confidence Not enough data
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Genome context
chr4: 36951021-36951078 [-]

Database links

Mature cfa-miR-1271

Accession MIMAT0006685
Description Canis familiaris cfa-miR-1271 mature miRNA
Sequence 1 - CUUGGCACCUAGUAAGCACU - 20
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415