miRBase entry: cfa-mir-1841

Stem-loop cfa-mir-1841


Accession
MI0008096
Description
Canis familiaris cfa-mir-1841 precursor miRNA


Sequence

AGAGGAAAGCUGGACGGCAAGCcugaagggaagaagguggcuccguccucuuuccaagcc
...((((((..((((((..((((...............)))))))))).)))))).....

Structure
--AGA      CU      CA    ugaagg 
     GGAAAG  GGACGG  AGCc      g
     ||||||  ||||||  ||||      a
     ccuuuc  ccugcc  ucgg      a
ccgaa      -u      --    uggaag 


Annotation confidence Not enough data
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Genome context
chr4: 8702838-8702897 [-]

Database links

Mature cfa-miR-1841

Accession MIMAT0006686
Description Canis familiaris cfa-miR-1841 mature miRNA
Sequence 1 - AGAGGAAAGCUGGACGGCAAGC - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415