Stem-loop sequence cfa-mir-99a-2

Accession MI0008102
Description Canis familiaris miR-99a-2 stem-loop
Gene family MIPF0000025; mir-99
Stem-loop 
--a   cg    uc   u      g  au 
   acc  uaga  cga cuugug ug  a
   |||  ||||  ||| |||||| ||   
   ugg  aucu  guu gaacac ac  g
gua   au    gu   c      -  cu
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Genome context
Coordinates (CanFam2) Overlapping transcripts
chr5: 15052369-15052425 [+]
intergenic
Clustered miRNAs
< 10kb from cfa-mir-99a-2
cfa-mir-99a-2 chr5: 15052369-15052425 [+]
cfa-let-7a-2 chr5: 15057786-15057881 [+]

Mature sequence cfa-miR-99a

Accession MIMAT0006668
Sequence

1 -  

aacccguagauccgaucuugu

 - 21

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Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:18392026 "Discovering microRNAs from deep sequencing data using miRDeep" Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N Nat Biotechnol. 26:407-415(2008).