miRBase entry: cfa-mir-350

Stem-loop cfa-mir-350


Accession
MI0008120
Description
Canis familiaris cfa-mir-350 precursor miRNA
Gene family
MIPF0000245; mir-350


Sequence

agugcacgcgcuuugggacagugaagaaaauaaugUUCACAAAGCCCAUACACUUUU
((((...(.(((((((((((.............))))).)))))).)...))))...

Structure
---    cac c      -     gugaa 
   agug   g gcuuug ggaca     g
   ||||   | |||||| |||||     a
   UCAC   C CGAAAC CUUgu     a
UUU    AUA C      A     aauaa 


Annotation confidence Not enough data
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Genome context
chr7: 34314838-34314894 [-]

Database links

Mature cfa-miR-350

Accession MIMAT0006704
Description Canis familiaris cfa-miR-350 mature miRNA
Sequence 36 - UUCACAAAGCCCAUACACUUUU - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415