miRBase entry: cfa-mir-29c-1

Stem-loop cfa-mir-29c-1


Accession
MI0008122
Description
Canis familiaris cfa-mir-29c-1 precursor miRNA
Gene family
MIPF0000009; mir-29


Sequence

accgauuucuccugguguucagagucuguuuuugucUAGCACCAUUUGAAAUCGGUUA
(((((((((...(((((((.(((...........))))))))))...)))))))))..

Structure
--         ucc       c   gucu 
  accgauuuc   ugguguu aga    g
  |||||||||   ||||||| |||    u
  UGGCUAAAG   ACCACGA Ucu    u
AU         UUU       -   guuu 


Annotation confidence Not enough data
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Genome context
chr7: 6588010-6588067 [-]

Database links

Mature cfa-miR-29c

Accession MIMAT0006705
Description Canis familiaris cfa-miR-29c mature miRNA
Sequence 37 - UAGCACCAUUUGAAAUCGGUUA - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415