miRBase entry: cfa-mir-376a-1

Stem-loop cfa-mir-376a-1


Accession
MI0008143
Description
Canis familiaris cfa-mir-376a-1 precursor miRNA
Gene family
MIPF0000091; mir-368


Sequence

guagauucuccuucuaugaguacauuauuuaugauuaAUCAUAGAGGAAAAUCCACGU
((.((((.((((.((((((...(((.....))).....)))))))))).)))).))..

Structure
--  a    c    u      --gua   u 
  gu gauu uccu cuauga     cau a
  || |||| |||| ||||||     ||| u
  CA CUAA AGGA GAUACU     gua u
UG  C    A    -      Aauua   u 


Annotation confidence Not enough data
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Genome context
chr8: 69271259-69271316 [+]
Clustered miRNAs
16 other miRNAs are < 10 kb from cfa-mir-376a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-376a

Accession MIMAT0006722
Description Canis familiaris cfa-miR-376a mature miRNA
Sequence 38 - AUCAUAGAGGAAAAUCCACGU - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415