Stem-loop cfa-mir-487b

Accession

MI0008144

Description

Canis familiaris cfa-mir-487b precursor miRNA

Gene family

MIPF0000018; mir-154

Sequence

gugguuaucccuguccuguucguuuuacucaugucgAAUCGUACAGGGUCAUCCACUU
((((....((((((.(.(((((............))))).).))))))....))))..

Structure

--    uuau      c u     uuuua 
  gugg    cccugu c guucg     c
  ||||    |||||| | |||||      
  CACC    GGGACA G UAAgc     u
UU    UACU      U C     uguac 

Annotation confidence Not enough data

Genome context

chr8: 69275496-69275553 [+]

Clustered miRNAs

16 other miRNAs are < 10 kb from cfa-mir-487b

Mature cfa-miR-487b

• Accession: MIMAT0006723
• Description: Canis familiaris cfa-miR-487b mature miRNA
• Sequence: 37 - AAUCGUACAGGGUCAUCCACUU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415