miRBase entry: cfa-mir-181a-2

Stem-loop cfa-mir-181a-2


Accession
MI0008152
Description
Canis familiaris cfa-mir-181a-2 precursor miRNA
Gene family
MIPF0000007; mir-181


Sequence

AACAUUCAACGCUGUCGGUGAGuuugggauuugaaaaaaccaccgaccguugacuguacc
.(((.((((((..(((((((.((((...........))))))))))))))))).)))...

Structure
--A   U      CU       A    ggga 
   ACA UCAACG  GUCGGUG Guuu    u
   ||| ||||||  ||||||| ||||    u
   ugu aguugc  cagccac caaa    u
cca   c      --       -    aaag 


Annotation confidence Not enough data
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Genome context
chr9: 58302547-58302606 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cfa-mir-181a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-181a

Accession MIMAT0006707
Description Canis familiaris cfa-miR-181a mature miRNA
Sequence 1 - AACAUUCAACGCUGUCGGUGAG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415