miRBase entry: cfa-mir-142

Stem-loop cfa-mir-142


Accession
MI0008160
Description
Canis familiaris cfa-mir-142 precursor miRNA
Gene family
MIPF0000084; mir-142


Sequence

CCCAUAAAGUAGAAAGCACUAcuaacagcacuggaggguguaguguuuccuacuuuauggaug
.(((((((((((.(((((((((...(..(....)..)..))))))))).)))))))))))...

Structure
--C           A         uaa ag a 
   CCAUAAAGUAG AAGCACUAc   c  c c
   ||||||||||| |||||||||   |  |  
   gguauuucauc uuugugaug   g  g u
gua           c         -ug ga g 


Annotation confidence Not enough data
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Genome context
chr9: 32977393-32977455 [-]

Database links

Mature cfa-miR-142

Accession MIMAT0006736
Description Canis familiaris cfa-miR-142 mature miRNA
Sequence 1 - CCCAUAAAGUAGAAAGCACUA - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415