Stem-loop cfa-mir-450b

Accession

MI0008172

Description

Canis familiaris cfa-mir-450b precursor miRNA

Gene family

MIPF0000128; mir-450

Sequence

UUUUGCAAUAUGUUCCUGAAUauguaauauaaguguauugggaacauuuugcauccau
...(((((.((((((((((((((.........)))).)))))))))).))))).....

Structure

--UUU     U          -    gua 
     UGCAA AUGUUCCUGA AUau   a
     ||||| |||||||||| ||||   u
     acguu uacaaggguu ugug   a
uaccu     u          a    aau 

Annotation confidence Not enough data

Genome context

chrX: 105177287-105177344 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from cfa-mir-450b

Mature cfa-miR-450b

• Accession: MIMAT0006748
• Description: Canis familiaris cfa-miR-450b mature miRNA
• Sequence: 1 - UUUUGCAAUAUGUUCCUGAAU - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415