Stem-loop cfa-mir-221

Accession

MI0008183

Description

Canis familiaris cfa-mir-221 precursor miRNA

Gene family

MIPF0000051; mir-221

Sequence

accuggcauacaauguagauuucuguguuuguugggcaacAGCUACAUUGUCUGCUGGGUUU
((((((((.(((((((((....((((((((...)))).))))))))))))).))))))))..

Structure

--        u         auuu    -    g 
  accuggca acaauguag    cugu guuu  
  |||||||| |||||||||    |||| |||| u
  UGGGUCGU UGUUACAUC    GAca cggg  
UU        C         ----    a    u 

Annotation confidence Not enough data

Genome context

chrX: 39523890-39523951 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-mir-221

Mature cfa-miR-221

• Accession: MIMAT0006757
• Description: Canis familiaris cfa-miR-221 mature miRNA
• Sequence: 41 - AGCUACAUUGUCUGCUGGGUUU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415