miRBase entry: cel-mir-1833

Stem-loop cel-mir-1833


Accession
MI0008203
Description
Caenorhabditis elegans cel-mir-1833 precursor miRNA


Sequence

11 reads, 0 reads per million, 7 experiments
acgcuuacuucgcaagccucgcgcguuuucuuuucaagagaaaaagcgugCGAGGCUUGCGAAAUAAGUGUGC
(((((((.(((((((((((((((((((((((((...)))))))..)))))))))))))))))).)))))))..

Structure
--       c                  --       u 
  acgcuua uucgcaagccucgcgcgu  uuucuuu  
  ||||||| ||||||||||||||||||  ||||||| c
  UGUGAAU AAGCGUUCGGAGCgugcg  aaagaga  
CG       A                  aa       a 


Annotation confidence Not enough data
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Genome context
chrIV: 15012347-15012419 [-]

Database links

Mature cel-miR-1833

Accession MIMAT0006775
Description Caenorhabditis elegans cel-miR-1833 mature miRNA
Sequence 51 - CGAGGCUUGCGAAAUAAGUGUGC - 73
Evidence experimental
454 [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415