miRBase entry: osa-MIR1852

Stem-loop osa-MIR1852


Accession
MI0008229
Description
Oryza sativa osa-MIR1852 precursor miRNA

Literature search
2 open access papers mention osa-MIR1852
(2 sentences)

Sequence

reads, None reads per million, experiments
uagacuaacuaccccugcauucagaauucauauagcgauugaaaauugaacuccgugcacgguaguaguaguagucagaucuauuguuucuaaucaauugcuAUAUGGAUUCAGAAUGCAGGUguaguuuguuca
..(((.((((((.(((((((((.(((((((((((((((((((.......((((((....))).)))..((((((......)))))).......))))))))))))))))))).))))))))).)))))).)))..

Structure
ua   u      c         a                   --------------------aaauuga   -   u 
  gac aacuac ccugcauuc gaauucauauagcgauuga                           acu ccg g
  ||| |||||| ||||||||| |||||||||||||||||||                           ||| |||  
  uug uugaug GGACGUAAG CUUAGGUAUAucguuaacu                           uga ggc c
ac   u      U         A                   aaucuuuguuaucuagacugaugauga   u   a 


Annotation confidence Not enough data
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Genome context
Chr5: 20761025-20761159 [+]

Database links

Mature osa-miR1852

Accession MIMAT0007772
Description Oryza sativa osa-miR1852 mature miRNA
Sequence 103 - AUAUGGAUUCAGAAUGCAGGU - 123
Evidence experimental
454 [1]

References

  1. PubMed ID: 18687877
    A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
    "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
    "Genome Res (2008) 18:1456-1465