Stem-loop sequence osa-MIR1861b

Accession MI0008248
Description Oryza sativa miR1861b stem-loop
Gene family MIPF0000567; MIR1861
Stem-loop 
u  c      u     c        a                 uc      uc  ucu 
 ug auauuc uaggc cgaucuug ggcaggaacugaguagu  gugaac  gc   a
 || |||||| ||||| |||||||| |||||||||||||||||  ||||||  ||    
 ac uauaag gucug gcuagaac cuguccuuggcuuauca  cacuug  ug   u
a  a      u     a        c                 cc      cu  uug
Get sequence
Deep sequencing
723 reads, 4 experiments
Genome context
Coordinates (MSU7) Overlapping transcripts
Chr2: 20715962-20716079 [+]
intergenic
Clustered miRNAs
< 10kb from osa-MIR1861b
osa-MIR1861b Chr2: 20715962-20716079 [+]
osa-MIR1861c Chr2: 20716174-20716280 [+]

Mature sequence osa-miR1861b

Accession MIMAT0007797
Sequence

18 -  

cgaucuugaggcaggaacugag

 - 39

Get sequence
Deep sequencing 655 reads, 4 experiments
Evidence experimental; 454 [1]

References

1
PMID:18687877 "A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains" Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C Genome Res. 18:1456-1465(2008).