Stem-loop sequence osa-MIR1861f

Accession MI0008252
Description Oryza sativa miR1861f stem-loop
Gene family MIPF0000567; MIR1861
Stem-loop 
u cg     u     c        a                 u u     uu  ucu 
 g  uauuc uaggc cgaucuug ggcaggaacugaguagu g ugaac  gc   a
 |  ||||| ||||| |||||||| ||||||||||||||||| | |||||  ||    
 c  auaag aucug gcuagaac cuguccuuggcuuauca c acuug  ug   u
a au     u     a        c                 c c     cu  uug
Get sequence
Deep sequencing
723 reads, 4 experiments
Genome context
Coordinates (MSU7) Overlapping transcripts
Chr5: 18668398-18668513 [+]
intergenic
Clustered miRNAs
< 10kb from osa-MIR1861f
osa-MIR1861f Chr5: 18668398-18668513 [+]
osa-MIR1861g Chr5: 18668611-18668717 [+]

Mature sequence osa-miR1861f

Accession MIMAT0007801
Sequence

17 -  

cgaucuugaggcaggaacugag

 - 38

Get sequence
Deep sequencing 655 reads, 4 experiments
Evidence experimental; 454 [1]

References

1
PMID:18687877 "A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains" Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C Genome Res. 18:1456-1465(2008).