Stem-loop osa-MIR1861g

Accession

MI0008253

Description

Oryza sativa osa-MIR1861g precursor miRNA

Gene family

MIPF0000567; MIR1861

Literature search

8 open access papers mention osa-MIR1861g
(47 sentences)

Sequence

1 reads, 1 reads per million, 1 experiments

cgguguugcauauucuuaggccCAGUCUUGUGGCAAGAACUGAGuaguucguuaacucgcuacgugguucuugucacaagaucgagccugugaauaugcaaaguugg
(((..((((((((((.(((((.(.((((((((((((((((((.(((((..........))))).)))))))))))))))))).).))))).))))))))))..))).

Structure

-   ug          u     c A                  A     ucgu 
 cgg  uugcauauuc uaggc C GUCUUGUGGCAAGAACUG Guagu    u
 |||  |||||||||| ||||| | |||||||||||||||||| |||||     
 guu  aacguauaag guccg g uagaacacuguucuuggu caucg    a
g   ga          u     a c                  g     cuca 

Annotation confidence Not enough data

Genome context

Chr5: 18668611-18668717 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from osa-MIR1861g

Mature osa-miR1861g

• Accession: MIMAT0007802
• Description: Oryza sativa osa-miR1861g mature miRNA
• Sequence: 23 - CAGUCUUGUGGCAAGAACUGAG - 44
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18687877
   A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
   "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
   "Genome Res (2008) 18:1456-1465