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miRBase |
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Stem-loop sequence osa-MIR1874 |
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Accession | MI0008277 (change log) | ||||
Description | Oryza sativa miR1874 stem-loop | ||||
Literature search |
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8 open access papers mention osa-MIR1874 | ||||
Stem-loop |
-cc a caguggu a a c u -a a - aucuucga a 5' auaaucaucuauu gua gaag cau ggg uac ac ccauccaua ggg uucga ugugccu g ||||||||||||| ||| |||| ||| ||| ||| || ||||||||| ||| ||||| ||||||| a 3' uauugguagauaa cau uuuc gua ccc aug ug gguagguau ccc agguu acauggg u uuu a ------- c g a - ga a u -------g a |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence osa-miR1874-5p |
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Accession | MIMAT0007827 |
Sequence |
34 - uagggcuacuacaccauccauaag - 57 |
Evidence | experimental; 454 [1], Illumina [3] |
Mature sequence osa-miR1874-3p |
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Accession | MIMAT0007828 |
Sequence |
103 - uauggauggagguguaacccgaug - 126 |
Deep sequencing | 3 reads, 2 experiments |
Evidence | experimental; 454 [1], cloned [2] |
Database links |
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References |
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1 |
PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"
Genome Res. 18:1456-1465(2008).
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3 |
PMID:19103661
"Characterization and expression profiles of miRNAs in rice seeds"
Nucleic Acids Res. 37:916-930(2009).
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