miRBase entry: osa-MIR1882f

Stem-loop osa-MIR1882f


Accession
MI0008293
Description
Oryza sativa osa-MIR1882f precursor miRNA
Gene family
MIPF0000571; MIR1882


Sequence

uguuaucguuaccaauauccuAGAUUGCUUUCAAGGUCAUUUCUUuagggaaccccauucccauaaauucaguauccaaagcugguugcuguaucuaugggaauaaggguuccuaacgaaaugaucuuggaugcaaucuuggauuuugcggacgauaacg
.(((((((((.((((.((((.(((((((.((((((((((((((.(((((.(((((.(((((((((.((.(((((.(((....))).))))).)).)))))))))..)))))))))).)))))))))))))).))))))).)))).))).)))))))))).

Structure
u         a -   u    u       U              U     g     -c         a  u     u   a 
 guuaucguu c caa aucc AGAUUGC UUCAAGGUCAUUUC Uuagg aaccc  auucccaua au cagua cca a
 ||||||||| | ||| |||| ||||||| |||||||||||||| ||||| |||||  ||||||||| || ||||| |||  
 caauagcag g guu uagg ucuaacg agguucuaguaaag aaucc uuggg  uaaggguau ua gucgu ggu g
g         - c   u    u       u              c     -     aa         c  u     u   c 


Annotation confidence Not enough data
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Genome context
Chr11: 11073482-11073641 [+]

Database links

Mature osa-miR1882f

Accession MIMAT0007844
Description Oryza sativa osa-miR1882f mature miRNA
Sequence 22 - AGAUUGCUUUCAAGGUCAUUUCUU - 45
Evidence experimental
454 [1]

References

  1. PubMed ID: 18687877
    A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
    "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
    "Genome Res (2008) 18:1456-1465