Stem-loop osa-MIR812h

Accession

MI0008297

Description

Oryza sativa osa-MIR812h precursor miRNA

Gene family

MIPF0000345; MIR812

Literature search

10 open access papers mention osa-MIR812h
(16 sentences)

Sequence

487 reads, 311 reads per million, 2 experiments

uuguacucccuccgucccauuuuaagugcaaucaugaguuucgcccaacuuuaaucaucuguuuuauuugaacuuuuuauaaauaguauuuuuauuguuaugagauuauaaaauuuaaauAAGACGGAUGAUUAAAGUUGGACAcgaaaacucauggcuacacuuacaaugaaauggagggguacua
..((((.((((((((..((((.((((((...((((((((((((.((((((((((((((((((((((((((((..((((((((((((((....)))))).......))))))))))))))))))))))))))))))))))))...)).))))))))))...)))))).))))..))))))))))))..

Structure

uu    u        cc    u      caa          -  --c                            cu        -------      u 
  guac cccuccgu  cauu uaagug   ucaugaguuu cg   ccaacuuuaaucaucuguuuuauuugaa  uuuuauaa       auagua u
  |||| ||||||||  |||| ||||||   |||||||||| ||   ||||||||||||||||||||||||||||  ||||||||       ||||||  
  caug gggaggua  guaa auucac   gguacucaaa gc   GGUUGAAAUUAGUAGGCAGAAuaaauuu  aaaauauu       uguuau u
au    -        aa    c      auc          a  ACA                            --        agaguau      u 

Annotation confidence Not enough data

Genome context

Chr3: 1164921-1165107 [-]

Mature osa-miR812h

• Accession: MIMAT0007848
• Description: Oryza sativa osa-miR812h mature miRNA
• Sequence: 121 - AAGACGGAUGAUUAAAGUUGGACA - 144
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18687877
   A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
   "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
   "Genome Res (2008) 18:1456-1465