Stem-loop aga-mir-1890

Accession

MI0008311

Description

Anopheles gambiae aga-mir-1890 precursor miRNA

Literature search

2 open access papers mention aga-mir-1890
(5 sentences)

Sequence

gucguguggacggccagagcuaauuggaguauuucuugaggaauauuuuugacaagcucaUGAAAUCUUUGAUUAGGUCUgguuauucguuacgac
((((((.(((.(((((((.((((((((((.(((((.((((................)))).))))))))))))))).))))))).)))..))))))

Structure

      -u   c       g          u     u    gaauauu 
gucgug  gga ggccaga cuaauuggag auuuc ugag       u
||||||  ||| ||||||| |||||||||| ||||| ||||        
cagcau  cuu uuggUCU GAUUAGUUUC UAAAG acuc       u
      ug   a       G          -     U    gaacagu 

Annotation confidence Low

Comments

This mature miRNA was cloned from Anopheles stepheni, and mapped to the A. gambiae genome [1].

Genome context

chr3R: 21181082-21181177 [-]

Mature aga-miR-1890

• Accession: MIMAT0007861
• Description: Anopheles gambiae aga-miR-1890 mature miRNA
• Sequence: 61 - UGAAAUCUUUGAUUAGGUCU - 80
• Evidence: not_experimental

References

1. PubMed ID: 18500992
   Cloning, characterization, and expression of microRNAs from the Asian malaria mosquito, Anopheles stephensi
   Mead EA, Tu Z
   BMC Genomics (2008) 9:244