miRBase entry: aga-mir-1890

Stem-loop aga-mir-1890


Accession
MI0008311
Description
Anopheles gambiae aga-mir-1890 precursor miRNA
Gene family
MIPF0000848; mir-1890

Literature search
2 open access papers mention aga-mir-1890
(5 sentences)

Sequence

gucguguggacggccagagcuaauuggaguauuucuugaggaauauuuuugacaagcucaUGAAAUCUUUGAUUAGGUCUgguuauucguuacgac
((((((.(((.(((((((.((((((((((.(((((.((((................)))).))))))))))))))).))))))).)))..))))))

Structure
      -u   c       g          u     u    gaauauu 
gucgug  gga ggccaga cuaauuggag auuuc ugag       u
||||||  ||| ||||||| |||||||||| ||||| ||||        
cagcau  cuu uuggUCU GAUUAGUUUC UAAAG acuc       u
      ug   a       G          -     U    gaacagu 


Annotation confidence Not enough data
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Comments
This mature miRNA was cloned from Anopheles stepheni, and mapped to the A. gambiae genome [1].

Genome context
chr3R: 21181082-21181177 [-]

Database links

Mature aga-miR-1890

Accession MIMAT0007861
Description Anopheles gambiae aga-miR-1890 mature miRNA
Sequence 61 - UGAAAUCUUUGAUUAGGUCU - 80
Evidence not_experimental

References

  1. PubMed ID: 18500992
    Cloning, characterization, and expression of microRNAs from the Asian malaria mosquito, Anopheles stephensi
    Mead EA, Tu Z
    BMC Genomics (2008) 9:244