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miRBase |
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Stem-loop sequence bmo-mir-317 |
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Accession | MI0008349 (change log) | ||||
Description | Bombyx mori miR-317 stem-loop | ||||
Gene family | MIPF0000144; mir-317 | ||||
Literature search |
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8 open access papers mention bmo-mir-317 | ||||
Stem-loop |
uc c - -- c u gaaaa 5' gggcua gaacgac g ggugccac gcugug uc cuc u |||||| ||||||| | |||||||| |||||| || ||| u 3' cuugau cuuguug c cuauggug cgacac ag gag a cc a u gu a u gcggu |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
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Mature sequence bmo-miR-317-5p |
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Accession | MIMAT0015277 |
Previous IDs | bmo-miR-317* |
Sequence |
16 - cgggugccacgcugugcucucu - 37 |
Deep sequencing | 23 reads, 3 experiments |
Evidence | experimental; Illumina [3] |
Database links |
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Mature sequence bmo-miR-317-3p |
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Accession | MIMAT0007906 |
Previous IDs | bmo-miR-317 |
Sequence |
53 - agugaacacagcuggugguauc - 74 |
Deep sequencing | 11784 reads, 3 experiments |
Evidence | experimental; cloned [2], Illumina [3] |
Database links |
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References |
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1 |
PMID:18507836
"Identification and characteristics of microRNAs from Bombyx mori"
BMC Genomics. 9:248(2008).
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2 |
PMID:18714353
"The silkworm (Bombyx mori) microRNAs and their expressions in multiple developmental stages"
PLoS One. 3:e2997(2008).
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3 |
PMID:20199675
"MicroRNAs of Bombyx mori identified by Solexa sequencing"
BMC Genomics. 11:148(2010).
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