Stem-loop sequence sly-MIR1916

Accession MI0008351
Description Solanum lycopersicum miR1916 stem-loop
Stem-loop 
      c          -   c                           a   c       aa                   g        a   c          a 
gccuaa uuauugguga ccu uuaaauuuggcacgaaauuucacuuag cac ucaagua  gugauguucauuuuagaca cucaugua ggu uuguuguguc u
|||||| |||||||||| ||| ||||||||||||||||||||||||||| ||| |||||||  ||||||||||||||||||| |||||||| ||| |||||||||| u
cggauu aguaaccacu gga aauuugaacugugcuuuaaagugaauc gug aguucau  cgcuacaaguaaaaucugu gaguacau cca aacaacauag u
      a          a   -                           c   a       -c                   g        c   a          u
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Genome context
Coordinates (SL2.40) Overlapping transcripts
SL2.40ch08: 54623283-54623496 [+]
intergenic

Mature sequence sly-miR1916

Accession MIMAT0007908
Sequence

38 -  

auuucacuuagacaccucaa

 - 57

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Evidence experimental; 454 [1]

References

1
PMID:18653800 "Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening" Moxon S, Jing R, Szittya G, Schwach F, Rusholme Pilcher RL, Moulton V, Dalmay T Genome Res. 18:1602-1609(2008).