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miRBase |
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Stem-loop sequence sly-MIR166b |
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Accession | MI0008359 (change log) | ||||
Description | Solanum lycopersicum miR166b stem-loop | ||||
Gene family | MIPF0000004; MIR166 | ||||
Literature search |
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25 open access papers mention sly-MIR166b | ||||
Stem-loop |
a aucaua a ucucu a uu cu g u c --ua c --a -accaug c 5' uccc uag uggagga gu caguug ggggaaug gucugg cga g cac aau gau cauaaucccu uauau cuuuu a |||| ||| ||||||| || |||||| |||||||| |||||| ||| | ||| ||| ||| |||||||||| ||||| ||||| a 3' aggg auc aucuccu ca guuaac ccccuuac cggacc gcu u gug uug cua guauugggga guaua gaaaa a g -----g - ---uu c uu ag g u a ugua a aaa auauuua a |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence sly-miR166b |
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Accession | MIMAT0007916 |
Sequence |
154 - ucggaccaggcuucauucccc - 174 |
Evidence | experimental; 454 [1] |
References |
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1 |
PMID:18653800
"Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening"
Genome Res. 18:1602-1609(2008).
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