Stem-loop sequence sly-MIR167

Accession MI0008360
Description Solanum lycopersicum miR167 stem-loop
Gene family MIPF0000023; MIR167_1
Stem-loop 
     -ca   c ag   u   a       g        aaa        uu    ca 
ucgug   gca u  cag uga gcugcca caugaucu   cuuuccuu  aguu  a
|||||   ||| |  ||| ||| ||||||| ||||||||   ||||||||  ||||  a
agcac   cgu a  guc auu cgacggu guacuaga   gaaaggag  uuaa  u
     uac   a cu   c   c       -        cua        -c    ua
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Genome context
Coordinates (SL2.40) Overlapping transcripts
SL2.40ch06: 45629356-45629471 [-]
intergenic

Mature sequence sly-miR167

Accession MIMAT0007917
Sequence

19 -  

ugaagcugccagcaugaucua

 - 39

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Evidence experimental; 454 [1]

References

1
PMID:18653800 "Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening" Moxon S, Jing R, Szittya G, Schwach F, Rusholme Pilcher RL, Moulton V, Dalmay T Genome Res. 18:1602-1609(2008).
2
PMID:18602455 "Identification of conserved microRNAs and their targets from Solanum lycopersicum Mill" Zhang J, Zeng R, Chen J, Liu X, Liao Q Gene. 423:1-7(2008).