Stem-loop sequence sly-MIR171b

Accession MI0008366
Description Solanum lycopersicum miR171b stem-loop
Gene family MIPF0000030; MIR171_1
Stem-loop 
   a        ug             a    cac    uua 
acg gauauugg  cgguucaauuaga agcg   uucu   u
||| ||||||||  ||||||||||||| ||||   ||||    
ugc cuauaacc  gccgaguuaauuu uugc   aaga   a
   a        gu             a    uuc    uau
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Genome context
Coordinates (SL2.40) Overlapping transcripts
SL2.40ch02: 39361368-39361453 [-]
intergenic

Mature sequence sly-miR171b

Accession MIMAT0007923
Sequence

65 -  

uugagccgugccaauaucacg

 - 85

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Evidence experimental; 454 [1]

References

1
PMID:18653800 "Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening" Moxon S, Jing R, Szittya G, Schwach F, Rusholme Pilcher RL, Moulton V, Dalmay T Genome Res. 18:1602-1609(2008).