miRBase entry: ptr-mir-103-2

Stem-loop ptr-mir-103-2


Accession
MI0008409
Description
Pan troglodytes ptr-mir-103-2 precursor miRNA
Gene family
MIPF0000024; mir-103

Literature search
1 open access papers mention ptr-mir-103-2
(1 sentences)

Sequence

ugugcuuucagcuucuuuacagugcugccuuguagcauucaggucaAGCAGCAUUGUACAGGGCUAUGAaagaacca
.((.(((((((((.((.(((((((((((.(((.(.(.....).))))))))))))))).)))))..)))))).))..

Structure
-u  g      --   u  u           c   u g a 
  gu cuuuca  gcu cu uacagugcugc uug a c u
  || ||||||  ||| || ||||||||||| ||| | | u
  ca gaaAGU  CGG GA AUGUUACGACG Aac u g c
ac  a      AU   -  C           -   - g a 


Annotation confidence Not enough data
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Genome context
chr20: 3789622-3789698 [+]

Database links

Mature ptr-miR-103

Accession MIMAT0002446
Description Pan troglodytes ptr-miR-103 mature miRNA
Sequence 47 - AGCAGCAUUGUACAGGGCUAUGA - 69
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70