miRBase entry: ptr-mir-10a

Stem-loop ptr-mir-10a


Accession
MI0008410
Description
Pan troglodytes ptr-mir-10a precursor miRNA
Gene family
MIPF0000033; mir-10


Sequence

aucugucugucuucuguauaUACCCUGUAGAUCCGAAUUUGUGuaaggaauuuuguggucacaaauucguaucuaggggaauauguaguugacauaaacacuccgcucu
...(((.((((..((((((((.((((.(((((.((((((((((................)))))))))).))))))))).))))))))..))))...))).........

Structure
------auc   --c    uu        A    G     C          uaaggaa 
         ugu   uguc  cuguauaU CCCU UAGAU CGAAUUUGUG       u
         |||   ||||  |||||||| |||| ||||| ||||||||||        
         aca   acag  gauguaua gggg aucua gcuuaaacac       u
ucucgccuc   aau    uu        a    -     u          ugguguu 


Annotation confidence Not enough data
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Genome context
chr17: 9252039-9252147 [+]

Database links

Mature ptr-miR-10a

Accession MIMAT0007944
Description Pan troglodytes ptr-miR-10a mature miRNA
Sequence 21 - UACCCUGUAGAUCCGAAUUUGUG - 43
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70