miRBase entry: ptr-mir-10b

Stem-loop ptr-mir-10b


Accession
MI0008411
Description
Pan troglodytes ptr-mir-10b precursor miRNA
Gene family
MIPF0000033; mir-10


Sequence

cagagguuguaacguugucuauauaUACCCUGUAGAACCGAAUUUGUGugguauccguauagucacagauucgauucuaggggaauauauggucgaugcaaaaacuuca
..((((((....(((((.((((((((.((((.(((((.((((((((((.(.(((....))).))))))))))).))))))))).)))))))).)))))....)))))).

Structure
ca      guaa     u        A    G     C          u g   c 
  gagguu    cguug cuauauaU CCCU UAGAA CGAAUUUGUG g uau c
  ||||||    ||||| |||||||| |||| ||||| |||||||||| | |||  
  cuucaa    guagc gguauaua gggg aucuu gcuuagacac u aua g
-a      aaac     u        a    -     a          - g   u 


Annotation confidence Not enough data
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Genome context
chr2B: 66456565-66456673 [+]

Database links

Mature ptr-miR-10b

Accession MIMAT0007945
Description Pan troglodytes ptr-miR-10b mature miRNA
Sequence 26 - UACCCUGUAGAACCGAAUUUGUG - 48
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70