miRBase entry: ptr-mir-1178

Stem-loop ptr-mir-1178


Accession
MI0008413
Description
Pan troglodytes ptr-mir-1178 precursor miRNA
Gene family
MIPF0000601; mir-1178

Literature search
1 open access papers mention ptr-mir-1178
(1 sentences)

Sequence

ggguuggcuggcagaggaagggaaggguccggggucggcugagcaugcccucaggUUGCUCACUGUUCUUCCCUAGaaugucaggugaug
..((((.((((((.....(((((((((....((((.(.(((((......))))).).))))....)))))))))....)))))).)))).

Structure
gg    g      gagga         uccg    c g     ca 
  guug cuggca     agggaaggg    gggu g cugag  u
  |||| ||||||     |||||||||    |||| | |||||   
  uagu gacugu     UCCCUUCUU    CUCG U gacuc  g
-g    g      -aaGA         GUCA    U g     cc 


Annotation confidence Not enough data
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Genome context
chr12: 122936872-122936961 [-]

Database links

Mature ptr-miR-1178

Accession MIMAT0007947
Description Pan troglodytes ptr-miR-1178 mature miRNA
Sequence 56 - UUGCUCACUGUUCUUCCCUAG - 76
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70