miRBase entry: ptr-mir-1182

Stem-loop ptr-mir-1182


Accession
MI0008416
Description
Pan troglodytes ptr-mir-1182 precursor miRNA
Gene family
MIPF0000673; mir-1182


Sequence

gggacuugucacugccugucuccucccucuccagcagcgacuggauucuggaguccaucuaGAGGGUCUUGGGAGGGAUGUGACuguugggaagcc
.((.(((.(((..((..(((.(.((((((.((((....((((...(((((((.....))))))))))))))))))))).).))).))))).)))))

Structure
g  a   g   cu  cu   u c      u    cagc    gga       g 
 gg cuu uca  gc  guc c ucccuc ccag    gacu   uucugga u
 || ||| |||  ||  ||| | |||||| ||||    ||||   ||||||| c
 cc gaa ggu  ug  CAG G AGGGAG GGUU    CUGG   GAGaucu c
-  -   g   --  -u   U U      -    ----    ---       a 


Annotation confidence Not enough data
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Genome context
chr1: 210030464-210030559 [-]

Database links

Mature ptr-miR-1182

Accession MIMAT0007950
Description Pan troglodytes ptr-miR-1182 mature miRNA
Sequence 62 - GAGGGUCUUGGGAGGGAUGUGAC - 84
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70