miRBase entry: ptr-mir-1183

Stem-loop ptr-mir-1183


Accession
MI0008417
Description
Pan troglodytes ptr-mir-1183 precursor miRNA
Gene family
MIPF0000668; mir-1183


Sequence

uuauucaaaugcucggagacacagaacauuagagaagacaggaguuCACUGUAGGUGAUGGUGAGAGUGGGCAuggagcaggagugcc
.(((((...(((((.(.(.(((....(((((..(...((((.......))))...)..)))))...)))..).).))))).)))))..

Structure
-u     aaa     g a -a   agaa     ga aag    ga 
  uauuc   ugcuc g g  cac    cauua  g   acag  g
  |||||   ||||| | |  |||    |||||  |   ||||  u
  gugag   acgag u C  GUG    GUGGU  U   UGUC  u
cc     --g     g A GG   -AGA     AG GGA    AC 


Annotation confidence Not enough data
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Genome context
chr7: 20581454-20581541 [+]

Database links

Mature ptr-miR-1183

Accession MIMAT0007951
Description Pan troglodytes ptr-miR-1183 mature miRNA
Sequence 47 - CACUGUAGGUGAUGGUGAGAGUGGGCA - 73
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70