miRBase entry: ptr-mir-1202

Stem-loop ptr-mir-1202


Accession
MI0008424
Description
Pan troglodytes ptr-mir-1202 precursor miRNA
Gene family
MIPF0000613; mir-1202


Sequence

cugcugcagagGUGCCAGCUGCAGUGGGGGAGgcacugccagggcugcccacucugcuuagccagcaggugccaagaacagg
...(((....((((((.((((((((((((..((((((.....)).))))..)))))))..).)))).)))))).....))).

Structure
cug   -caga      A    - --       GA    -  g 
   cug     gGUGCC GCUG C  AGUGGGG  Ggca cu c
   |||     |||||| |||| |  |||||||  |||| || c
   gac     ccgugg cgac g  ucgucuc  ccgu gg a
--g   aagaa      a    c au       ac    c  g 


Annotation confidence Not enough data
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Genome context
chr6: 160135921-160136002 [+]

Database links

Mature ptr-miR-1202

Accession MIMAT0007956
Description Pan troglodytes ptr-miR-1202 mature miRNA
Sequence 12 - GUGCCAGCUGCAGUGGGGGAG - 32
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70