miRBase entry: ptr-mir-1203

Stem-loop ptr-mir-1203


Accession
MI0008425
Description
Pan troglodytes ptr-mir-1203 precursor miRNA
Gene family
MIPF0000633; mir-1203


Sequence

ccucCCCGGAGCCAGGAUGCAGCUCaagccaccgcgggguguuuagcgcucuucaguggcuccagauuguggcgcuggugcagg
(((.(((((.((((.(((....((..((((((.(.(((((((...))))))).).))))))..))))).)))).)))).).)))

Structure
   c -    A    G   GCAG  Ca      c c       u 
ccu C CCGG GCCA GAU    CU  agccac g ggggugu  
||| | |||| |||| |||    ||  |||||| | ||||||| u
gga g gguc cggu uua    ga  ucggug c ucucgcg  
   c u    g    g   ----  cc      a u       a 


Annotation confidence Not enough data
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Genome context
chr17: 9675125-9675208 [+]

Database links

Mature ptr-miR-1203

Accession MIMAT0007957
Description Pan troglodytes ptr-miR-1203 mature miRNA
Sequence 5 - CCCGGAGCCAGGAUGCAGCUC - 25
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70