miRBase entry: ptr-mir-1208

Stem-loop ptr-mir-1208


Accession
MI0008430
Description
Pan troglodytes ptr-mir-1208 precursor miRNA
Gene family
MIPF0000628; mir-1208


Sequence

accggcagaaUCACUGUUCAGACAGGCGGAgacgggucuuucucgcccucugaugagucaccacuguggugg
((((.(((....(((..(((((..((((((((......)))).)))).)))))..))).....)))))))..

Structure
--    g   -aaUC   GU     CA    -    cg 
  accg cag     ACU  UCAGA  GGCG GAga  g
  |||| |||     |||  |||||  |||| ||||   
  uggu guc     uga  agucu  ccgc cuuu  g
gg    -   accac   gu     -c    u    cu 


Annotation confidence Not enough data
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Genome context
chr8: 130561368-130561439 [+]

Database links

Mature ptr-miR-1208

Accession MIMAT0007962
Description Pan troglodytes ptr-miR-1208 mature miRNA
Sequence 11 - UCACUGUUCAGACAGGCGGA - 30
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70