miRBase entry: ptr-mir-122

Stem-loop ptr-mir-122


Accession
MI0008431
Description
Pan troglodytes ptr-mir-122 precursor miRNA
Gene family
MIPF0000095; mir-122

Literature search
9 open access papers mention ptr-mir-122
(256 sentences)

Sequence

cuuagcagagcugUGGAGUGUGACAAUGGUGUUUGugucuaaauuaucaaacgccauuaucacacuaaauagcuacugcuaggc
((((((((((((((..(((((((.(((((((((((............))))))))))).)))))))..)))))).)))))))).

Structure
-        -      GG       C           ugucu 
 cuuagcag agcugU  AGUGUGA AAUGGUGUUUG     a
 |||||||| ||||||  ||||||| |||||||||||      
 ggaucguc ucgaua  ucacacu uuaccgcaaac     a
c        a      aa       a           uauua 


Annotation confidence Not enough data
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Genome context
chr18: 55851820-55851903 [+]

Database links

Mature ptr-miR-122

Accession MIMAT0007963
Description Pan troglodytes ptr-miR-122 mature miRNA
Sequence 14 - UGGAGUGUGACAAUGGUGUUUG - 35
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70