miRBase entry: ptr-mir-1233-1

Stem-loop ptr-mir-1233-1


Accession
MI0008434
Description
Pan troglodytes ptr-mir-1233-1 precursor miRNA
Gene family
MIPF0000578; mir-1233


Sequence

gugagugggaggccagggcauggcagggggagcugcagggccgucggaggggccccagcaucUGAGCCCUGUCCUCCCGCAGg
....((((((((.((((((...((((......)))).(((((........)))))(((...))).)))))).))))))))...

Structure
guga        c      auggcagggggagcugcagggccgucggaggggccc   c 
    gugggagg cagggc                                    cag  
    |||||||| ||||||                                    ||| a
    CGCCCUCC GUCCCG                                    GUc  
-gGA        U      -----------------------------------A   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
AACZ04023539.1: 556-638 [-]

Database links

Mature ptr-miR-1233

Accession MIMAT0007966
Description Pan troglodytes ptr-miR-1233 mature miRNA
Sequence 63 - UGAGCCCUGUCCUCCCGCAG - 82
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70