miRBase entry: ptr-mir-1244-1

Stem-loop ptr-mir-1244-1


Accession
MI0008440
Description
Pan troglodytes ptr-mir-1244-1 precursor miRNA
Gene family
MIPF0000569; mir-1244


Sequence

ucuuauuccgagcauuccaguaacuuuuuuguguauguacuuagcuguacuauAAGUAGUUGGUUUGUAUGAGAUGGUUaaaaa
((((((.....(((..((((..(((......((((.((((......)))))))))))..))))..)))))))))..........

Structure
----------      uccga   uu    ua   uuuuug    u    uu 
          ucuuau     gca  ccag  acu      ugua guac  a
          ||||||     |||  ||||  |||      |||| ||||   
          AGAGUA     UGU  GGUU  UGA      Auau caug  g
aaaaaUUGGU      -----   UU    GA   ------    -    uc 


Annotation confidence Not enough data
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Genome context
chr1: 61877267-61877350 [+]

Database links

Mature ptr-miR-1244

Accession MIMAT0007970
Description Pan troglodytes ptr-miR-1244 mature miRNA
Sequence 54 - AAGUAGUUGGUUUGUAUGAGAUGGUU - 79
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70