miRBase entry: ptr-mir-1244-4

Stem-loop ptr-mir-1244-4


Accession
MI0008443
Description
Pan troglodytes ptr-mir-1244-4 precursor miRNA
Gene family
MIPF0000569; mir-1244


Sequence

aucuuauuccgagcauuccaguaacuuuuuuguguauguacucagcuguacuauAAGUAGUUGGUUUGUAUGAGAUGGUUaaaa
(((((((.....(((..((((..(((......((((.((((......)))))))))))..))))..))))))))))........

Structure
--------       uccga   uu    ua   uuuuug    u    uc 
        aucuuau     gca  ccag  acu      ugua guac  a
        |||||||     |||  ||||  |||      |||| ||||   
        UAGAGUA     UGU  GGUU  UGA      Auau caug  g
aaaaUUGG       -----   UU    GA   ------    -    uc 


Annotation confidence Not enough data
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Genome context
chr12: 9630517-9630600 [-]

Database links

Mature ptr-miR-1244

Accession MIMAT0007970
Description Pan troglodytes ptr-miR-1244 mature miRNA
Sequence 55 - AAGUAGUUGGUUUGUAUGAGAUGGUU - 80
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70