miRBase entry: ptr-mir-1244-9

Stem-loop ptr-mir-1244-9


Accession
MI0008448
Description
Pan troglodytes ptr-mir-1244-9 precursor miRNA
Gene family
MIPF0000569; mir-1244


Sequence

ucuuauuccgagcauuccaguaacuuuuuuguguauauacuuagcuguacuauAAGUAGUUGGUUUGUAUGAGAUGGUUaaaaa
((((((.....(((..(((...(((..((((((((((........))))).))))).))))))..)))))))))..........

Structure
----------      uccga   uu   gua   uu     -     uac 
          ucuuau     gca  cca   acu  uuugu guaua   u
          ||||||     |||  |||   |||  ||||| |||||    
          AGAGUA     UGU  GGU   UGA  GAAua caugu   u
aaaaaUUGGU      -----   UU   ---   -U     u     cga 


Annotation confidence Not enough data
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Genome context
chr5: 118679394-118679477 [+]

Database links

Mature ptr-miR-1244

Accession MIMAT0007970
Description Pan troglodytes ptr-miR-1244 mature miRNA
Sequence 54 - AAGUAGUUGGUUUGUAUGAGAUGGUU - 79
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70