miRBase entry: ptr-mir-1245

Stem-loop ptr-mir-1245


Accession
MI0008451
Description
Pan troglodytes ptr-mir-1245 precursor miRNA
Gene family
MIPF0000620; mir-1245


Sequence

uuuauguauaagccuuuagaucaucugauguugaauacucuuuAAGUGAUCUAAAGGCCUACAUauaaa
..((((((...(((((((((((((.(((.............))).))))))))))))).))))))....

Structure
--uu      uaa             c   uguug 
    uaugua   gccuuuagaucau uga     a
    ||||||   ||||||||||||| |||     a
    aUACAU   CGGAAAUCUAGUG Auu     u
aaau      --C             A   ucuca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr2B: 79520746-79520814 [+]

Database links

Mature ptr-miR-1245

Accession MIMAT0007971
Description Pan troglodytes ptr-miR-1245 mature miRNA
Sequence 44 - AAGUGAUCUAAAGGCCUACAU - 64
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70