miRBase entry: ptr-mir-1246

Stem-loop ptr-mir-1246


Accession
MI0008452
Description
Pan troglodytes ptr-mir-1246 precursor miRNA
Gene family
MIPF0000627; mir-1246


Sequence

uguauccuugAAUGGAUUUUUGGAGCAGGaguggacaccugacccaaaggaaaucaauccauaggcuagcaa
(((..(((...((((((((((((..((((........))))..))))).......))))))))))...))).

Structure
-   -au   ugA       -------     AG    agu 
 ugu   ccu   AUGGAUU       UUUGG  CAGG   g
 |||   |||   |||||||       |||||  ||||    
 acg   gga   uaccuaa       aaacc  gucc   g
a   auc   ---       cuaaagg     ca    aca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr2B: 66910102-66910173 [-]

Database links

Mature ptr-miR-1246

Accession MIMAT0007972
Description Pan troglodytes ptr-miR-1246 mature miRNA
Sequence 11 - AAUGGAUUUUUGGAGCAGG - 29
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70